DisGeNET - a database of gene-disease associations

List of associated variants

HIV-1 infection, C2363741

Source: ALL

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Gene

Disease

Variant

Source

DSI _v

DPI _v

pLI

Consequence

AF_EXOME

AF_GENOME

Variant	Gene	DSI _v	DPI _v	Chr	Position	Consequence	Alleles	Class	AF EXOME	AF GENOME	Num. diseases
rs3869068	ZNRD1ASP	0.925		6	30036275	intron variant	C/T	snv		0.17	5
rs8321	ZNRD1	0.742	0.320	6	30064745	3 prime UTR variant	A/C	snv	5.4E-02	5.9E-02	16
rs2301254	WT1-AS ; WT1	0.882	0.160	11	32436129	intron variant	A/G	snv		0.48	3
rs6508	WT1-AS	0.882	0.160	11	32438918	non coding transcript exon variant	G/A	snv	8.3E-02	0.16	3
rs1799937	WT1	0.882	0.160	11	32389228	intron variant	A/G	snv	0.35	0.35	3
rs2234591	WT1	0.925	0.080	11	32399873	intron variant	T/C	snv		1.4E-03	2
rs1544410	VDR	0.542	0.760	12	47846052	intron variant	C/A;G;T	snv			78
rs17878969	VDR	1.000		12	47842624	3 prime UTR variant	TTTTTTTTTT/-;T;TT;TTT;TTTT;TTTTT;TTTTTT;TTTTTTT;TTTTTTTT;TTTTTTTTT;TTTTTTTTTTT;TTTTTTTTTTTT;TTTTTTTTTTTTT;TTTTTTTTTTTTTT;TTTTTTTTTTTTTTT;TTTTTTTTTTTTTTTTT;TTTTTTTTTTTTTTTTTTT	delins			1
rs11038628	TRIM5	1.000		11	5667710	missense variant	C/T	snv	0.14	0.14	1
rs146215995	TRIM5	1.000		11	5679850	missense variant	C/A;T	snv	8.0E-06; 9.5E-05		1
rs11157436	TRAV30	0.851	0.040	14	22168978	synonymous variant	C/T	snv		0.19	7
rs1406795590	TMED2	1.000		12	123586856	missense variant	G/A	snv			1
rs4986790	TLR4	0.438	0.800	9	117713024	missense variant	A/G;T	snv	6.1E-02; 4.0E-06		223
rs4986791	TLR4	0.456	0.840	9	117713324	missense variant	C/T	snv	5.7E-02	4.9E-02	182
rs3775291	TLR3	0.602	0.640	4	186082920	missense variant	C/G;T	snv	1.2E-04; 0.28		51
rs8177374	TIRAP	0.672	0.520	11	126292948	missense variant	C/T	snv	0.12	0.11	22
rs61550741	TIAM1	0.925		21	31133966	intron variant	A/G	snv		0.12	5
rs753269867	THBS1	0.925	0.080	15	39582202	missense variant	G/C	snv	6.3E-05		2
rs241447	TAP2	0.827	0.280	6	32828974	missense variant	T/C	snv	0.31	0.26	11
rs10892324	SLC37A4	0.925		11	119032329	upstream gene variant	T/A;G	snv			5
rs6542826	SH3RF3 ; RANBP2	0.925		2	109433263	intron variant	A/G	snv		0.51	5
rs35467001	SDK2	0.882	0.080	17	73383923	missense variant	G/A	snv	5.3E-02	6.3E-02	6
rs1291142	SAMHD1	1.000		20	36896959	intron variant	A/G;T	snv			1
rs2229116	RYR3	0.827	0.080	15	33613209	missense variant	A/G	snv	0.23	0.21	9
rs4835796	REEP2	0.925		5	138446426	3 prime UTR variant	T/G	snv		0.56	5